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<div class="fragment"><pre class="fragment"><a name="l00001"></a>00001 
<a name="l00002"></a>00002 <span class="preprocessor">#ifndef __FDTD_H__</span>
<a name="l00003"></a>00003 <span class="preprocessor"></span><span class="preprocessor">#define __FDTD_H__</span>
<a name="l00004"></a>00004 <span class="preprocessor"></span>
<a name="l00005"></a>00005 <span class="preprocessor">#include &lt;iostream&gt;</span>
<a name="l00006"></a>00006 <span class="preprocessor">#include &lt;fstream&gt;</span>
<a name="l00007"></a>00007 <span class="preprocessor">#include &lt;vector&gt;</span>
<a name="l00008"></a>00008 <span class="preprocessor">#include &lt;sstream&gt;</span>
<a name="l00009"></a>00009 <span class="preprocessor">#include &lt;cstdlib&gt;</span>
<a name="l00010"></a>00010 <span class="preprocessor">#include &lt;omd/treader.h&gt;</span>
<a name="l00011"></a>00011 
<a name="l00012"></a>00012 <span class="comment">// For 2D problems...</span>
<a name="l00013"></a>00013 
<a name="l00014"></a>00014 <span class="keyword">using</span> std::string;
<a name="l00015"></a>00015 <span class="keyword">using</span> std::vector;
<a name="l00016"></a>00016 <span class="keyword">using</span> std::ifstream;
<a name="l00017"></a>00017 <span class="keyword">using</span> std::istringstream;
<a name="l00018"></a>00018 
<a name="l00019"></a>00019 <span class="keyword">namespace </span>omd {
<a name="l00020"></a>00020   
<a name="l00021"></a>00021 <span class="preprocessor">#define FDCELL_EMPTY 0</span>
<a name="l00022"></a>00022 <span class="preprocessor"></span><span class="preprocessor">#define FDCELL_OCCUPIED 1</span>
<a name="l00023"></a>00023 <span class="preprocessor"></span><span class="preprocessor">#define FDCELL_PERIODIC 2</span>
<a name="l00024"></a>00024 <span class="preprocessor"></span>  
<a name="l00025"></a>00025 <span class="preprocessor">#define FD_MAX_VAR 50</span>
<a name="l00026"></a>00026 <span class="preprocessor"></span>  
<a name="l00027"></a><a class="code" href="structomd_1_1CellBoundary.html">00027</a>   <span class="keyword">struct </span><a class="code" href="structomd_1_1CellBoundary.html">CellBoundary</a> {
<a name="l00028"></a>00028     <span class="keywordtype">char</span> sym;
<a name="l00029"></a>00029     <span class="comment">// left right top bottom near far</span>
<a name="l00030"></a>00030     <span class="keywordtype">int</span>  l,r,t,b,n,f;
<a name="l00031"></a>00031   };
<a name="l00032"></a>00032     
<a name="l00033"></a><a class="code" href="classomd_1_1FDTDSolver.html">00033</a>   <span class="keyword">class </span><a class="code" href="classomd_1_1FDTDSolver.html">FDTDSolver</a> {
<a name="l00034"></a>00034     <span class="keyword">friend</span> <span class="keywordtype">double</span> read_table(<span class="keywordtype">double</span>, <span class="keywordtype">double</span>);
<a name="l00035"></a>00035     <span class="keyword">friend</span> <span class="keywordtype">double</span> dread_table(<span class="keywordtype">double</span>, <span class="keywordtype">double</span>);
<a name="l00036"></a>00036     
<a name="l00037"></a>00037     <span class="keywordtype">double</span>*  A;
<a name="l00038"></a>00038     <span class="keywordtype">double</span>*  T;
<a name="l00039"></a>00039     <span class="keywordtype">double</span>*  S;
<a name="l00040"></a>00040     <span class="keywordtype">double</span>*  Ext;
<a name="l00041"></a>00041     <span class="keywordtype">double</span>* dE;
<a name="l00042"></a>00042     <span class="keywordtype">double</span>* dS;
<a name="l00043"></a>00043     <span class="keywordtype">double</span>* dExt;
<a name="l00044"></a>00044     <span class="keywordtype">double</span>* sumE;
<a name="l00045"></a>00045     <span class="keywordtype">double</span>* sumS;
<a name="l00046"></a>00046     <span class="keywordtype">double</span>*  con;
<a name="l00047"></a>00047     <span class="keywordtype">double</span>*  cap;
<a name="l00048"></a>00048         
<a name="l00049"></a>00049     <span class="keywordtype">int</span> neqvar;
<a name="l00050"></a>00050     <span class="keyword">struct </span>{<span class="keywordtype">char</span> name[32]; <span class="keywordtype">double</span> value;} eqvar[FD_MAX_VAR];
<a name="l00051"></a>00051     
<a name="l00052"></a>00052     <span class="keywordtype">int</span> me; <span class="comment">// mpi rank</span>
<a name="l00053"></a>00053     <span class="keywordtype">int</span> nproc; <span class="comment">// number of proc</span>
<a name="l00054"></a>00054     <span class="keywordtype">int</span> occup; <span class="comment">// total # of occupied cells</span>
<a name="l00055"></a>00055     <span class="keywordtype">int</span> ncp;
<a name="l00056"></a>00056     <span class="keywordtype">int</span> ncell;
<a name="l00057"></a>00057     <span class="keywordtype">int</span> *lim; <span class="comment">// hi/lo limits of all procs</span>
<a name="l00058"></a>00058     <span class="keywordtype">int</span>* counts;
<a name="l00059"></a>00059     <span class="keywordtype">int</span>* displ;
<a name="l00060"></a>00060     <span class="keywordtype">int</span>* sendnum;
<a name="l00061"></a>00061     <span class="keywordtype">int</span>* recvnum;
<a name="l00062"></a>00062     <span class="keywordtype">int</span>** nlist; <span class="comment">// index to send</span>
<a name="l00063"></a>00063     <span class="keywordtype">int</span>** glist; <span class="comment">// index to receive</span>
<a name="l00064"></a>00064     <span class="keywordtype">double</span>** ndata; <span class="comment">// data to send</span>
<a name="l00065"></a>00065     <span class="keywordtype">double</span>** gdata; <span class="comment">// data to receive</span>
<a name="l00066"></a>00066     <span class="keywordtype">int</span>** clist; <span class="comment">// occupied cell list (not empty) of all procs</span>
<a name="l00067"></a>00067     
<a name="l00068"></a>00068     <span class="keywordtype">int</span> dim,nx,ny,nz;
<a name="l00069"></a>00069     <span class="keywordtype">int</span> forced_periodic;
<a name="l00070"></a>00070     <span class="keywordtype">int</span> step;
<a name="l00071"></a>00071     <span class="keywordtype">double</span> timestep;
<a name="l00072"></a>00072     <span class="keywordtype">double</span> spacestep;
<a name="l00073"></a>00073     <span class="keywordtype">double</span> h2inv; <span class="comment">// = 1/spacestep^2</span>
<a name="l00074"></a>00074     
<a name="l00075"></a>00075     <span class="comment">// map contains index to the coeficients</span>
<a name="l00076"></a>00076     <span class="keywordtype">int</span>* map;
<a name="l00077"></a>00077     
<a name="l00078"></a>00078     <span class="keywordtype">int</span> nbound;
<a name="l00079"></a>00079     <a class="code" href="structomd_1_1CellBoundary.html">CellBoundary</a>* bound;
<a name="l00080"></a>00080     
<a name="l00081"></a>00081     <span class="keywordtype">int</span> search_symbol(<span class="keywordtype">char</span> c);
<a name="l00082"></a>00082     <span class="keywordtype">char</span> translate_symbol(<span class="keywordtype">int</span> num);
<a name="l00083"></a>00083     
<a name="l00084"></a>00084     <span class="keywordtype">void</span> get_cellcoord(<span class="keywordtype">int</span> idx, <span class="keywordtype">int</span>&amp; i, <span class="keywordtype">int</span>&amp; j, <span class="keywordtype">int</span>&amp; k){
<a name="l00085"></a>00085       <span class="keywordtype">int</span> xy=nx*ny;
<a name="l00086"></a>00086       <span class="keywordtype">int</span> a=idx%xy;
<a name="l00087"></a>00087       k=idx/xy;
<a name="l00088"></a>00088       j=a/nx;
<a name="l00089"></a>00089       i=a%nx;
<a name="l00090"></a>00090     }
<a name="l00091"></a>00091     
<a name="l00092"></a>00092     <span class="keywordtype">int</span> index(<span class="keywordtype">int</span> i, <span class="keywordtype">int</span> j, <span class="keywordtype">int</span> k) {
<a name="l00093"></a>00093       <span class="keywordtype">int</span> idx=((k*nx*ny)+(i+j*nx));
<a name="l00094"></a>00094       <span class="keywordflow">if</span>(idx&lt;0||idx&gt;=dim) <span class="keywordflow">return</span> -1;
<a name="l00095"></a>00095       <span class="keywordflow">return</span> idx;
<a name="l00096"></a>00096     }
<a name="l00097"></a>00097     
<a name="l00098"></a>00098     <span class="keywordtype">void</span> initiate_mem();
<a name="l00099"></a>00099     <span class="keywordtype">void</span> initiate_comm();
<a name="l00100"></a>00100     <span class="keywordtype">void</span> sync_data();
<a name="l00101"></a>00101     <span class="keywordtype">void</span> get_neigcell_index(<span class="keywordtype">int</span>,<span class="keywordtype">int</span>&amp;,<span class="keywordtype">int</span>&amp;,<span class="keywordtype">int</span>&amp;,<span class="keywordtype">int</span>&amp;,<span class="keywordtype">int</span>&amp;,<span class="keywordtype">int</span>&amp;);
<a name="l00102"></a>00102     <span class="keywordtype">void</span> send_receive_list();
<a name="l00103"></a>00103     <span class="keywordtype">void</span> select_ncell(<span class="keywordtype">int</span>,<span class="keywordtype">int</span>,<span class="keywordtype">char</span>**);
<a name="l00104"></a>00104     <span class="keywordtype">bool</span> mycell(<span class="keywordtype">int</span>,<span class="keywordtype">int</span>,<span class="keywordtype">int</span>);
<a name="l00105"></a>00105     <span class="keywordtype">double</span> evaluate(<span class="keywordtype">string</span>&amp;);
<a name="l00106"></a>00106     <span class="keywordtype">double</span> evaluate(<span class="keywordtype">int</span>,<span class="keywordtype">int</span>,<span class="keywordtype">int</span>);
<a name="l00107"></a>00107     <span class="keywordtype">void</span> check_expression(<span class="keywordtype">string</span>&amp;,<span class="keywordtype">int</span>&amp;,<span class="keywordtype">int</span>&amp;,<span class="keywordtype">bool</span>&amp;);
<a name="l00108"></a>00108     
<a name="l00109"></a>00109   <span class="keyword">public</span>:
<a name="l00110"></a>00110     vector&lt;TableReader*&gt; table;
<a name="l00111"></a>00111     <span class="keywordtype">string</span> name;
<a name="l00112"></a>00112     <span class="keywordtype">string</span> str_src;
<a name="l00113"></a>00113     <span class="keywordtype">string</span> str_cap;
<a name="l00114"></a>00114     <span class="keywordtype">string</span> str_con;
<a name="l00115"></a>00115     
<a name="l00116"></a>00116     <a class="code" href="classomd_1_1FDTDSolver.html">FDTDSolver</a>(<span class="keywordtype">int</span>, <span class="keywordtype">int</span>, <span class="keywordtype">int</span>, <span class="keywordtype">string</span>, <span class="keywordtype">string</span>);
<a name="l00117"></a>00117     <span class="keyword">virtual</span> ~<a class="code" href="classomd_1_1FDTDSolver.html">FDTDSolver</a>();
<a name="l00118"></a>00118     
<a name="l00119"></a>00119     <span class="keywordtype">void</span> <a class="code" href="classomd_1_1FDTDSolver.html#ac353c16670451b9efcb5ee5c3b009616">communicate</a>(<span class="keywordtype">double</span>* ptr);
<a name="l00120"></a>00120     <span class="keywordtype">void</span> <a class="code" href="classomd_1_1FDTDSolver.html#ad3a293cda4f221ff6e707dfc8fe04784">collect</a>(<span class="keywordtype">double</span>* ptr);
<a name="l00121"></a>00121     <span class="keywordtype">void</span> AssignArray(<span class="keywordtype">double</span>*,<span class="keywordtype">int</span>,<span class="keywordtype">int</span>,<span class="keywordtype">int</span>,<span class="keywordtype">double</span>);
<a name="l00122"></a>00122     <span class="keywordtype">void</span> AssignArray(<span class="keywordtype">double</span>*,<span class="keywordtype">string</span>&amp;);
<a name="l00123"></a>00123     <span class="keywordtype">double</span>* GetSourceVector() {<span class="keywordflow">return</span> S;}
<a name="l00124"></a>00124     <span class="keywordtype">double</span>* GetExtVector() {<span class="keywordflow">return</span> Ext;}
<a name="l00125"></a>00125     <span class="keywordtype">double</span>* GetPostSourceVector() {<span class="keywordflow">return</span> dS;}
<a name="l00126"></a>00126     <span class="keywordtype">double</span>* GetPostExtVector() {<span class="keywordflow">return</span> dExt;}
<a name="l00127"></a>00127     <span class="keywordtype">double</span>* GetVector(){<span class="keywordflow">return</span> A;}
<a name="l00128"></a>00128     <span class="keywordtype">double</span>* GetConductivity(){<span class="keywordflow">return</span> con;}
<a name="l00129"></a>00129     <span class="keywordtype">double</span>* GetCapacity(){<span class="keywordflow">return</span> cap;}
<a name="l00130"></a>00130     <span class="keywordtype">double</span>* GetDelta(){<span class="keywordflow">return</span> dE;}
<a name="l00131"></a>00131     <span class="keywordtype">double</span>* GetSourceTally(){<span class="keywordflow">return</span> sumS;}
<a name="l00132"></a>00132     <span class="keywordtype">double</span>* GetExtTally(){<span class="keywordflow">return</span> sumE;}
<a name="l00133"></a>00133     <span class="keywordtype">double</span> GetTimestep(){<span class="keywordflow">return</span> timestep;}
<a name="l00134"></a>00134     <span class="keywordtype">double</span> GetSpacestep(){<span class="keywordflow">return</span> spacestep;}
<a name="l00135"></a>00135     <span class="keywordtype">int</span>  GetStep(){<span class="keywordflow">return</span> step;}
<a name="l00136"></a>00136     <span class="keywordtype">int</span> GetDim(){<span class="keywordflow">return</span> dim;}
<a name="l00137"></a>00137     <span class="keywordtype">void</span> GetDim(<span class="keywordtype">int</span>&amp; _nx, <span class="keywordtype">int</span>&amp; _ny, <span class="keywordtype">int</span>&amp; _nz){_nx=nx;_ny=ny;_nz=nz;}
<a name="l00138"></a>00138 
<a name="l00139"></a>00139     <span class="keywordtype">double</span> GetSum(<span class="keywordtype">double</span>*);
<a name="l00140"></a>00140     <span class="keywordtype">double</span> GetAverage(<span class="keywordtype">double</span>*);
<a name="l00141"></a>00141     
<a name="l00142"></a>00142     <span class="keywordtype">void</span> CopyMap(<span class="keywordtype">char</span>*); <span class="comment">// convert map array to character map</span>
<a name="l00143"></a>00143     
<a name="l00144"></a>00144     <span class="keywordtype">void</span> AddTable(<span class="keywordtype">string</span>);
<a name="l00145"></a>00145     <span class="keywordtype">void</span> SetSymbolMap(<span class="keywordtype">string</span> str);
<a name="l00146"></a>00146     <span class="keywordtype">void</span> AddEquVar(<span class="keywordtype">string</span>, <span class="keywordtype">double</span>);
<a name="l00147"></a>00147     <span class="keywordtype">void</span> SetEquVar(<span class="keywordtype">string</span>);
<a name="l00148"></a>00148 
<a name="l00149"></a>00149     <span class="keywordtype">void</span> SetMap(<span class="keyword">const</span> <span class="keywordtype">char</span>*);
<a name="l00150"></a>00150     <span class="keywordtype">void</span> Remap(<span class="keyword">const</span> <span class="keywordtype">char</span>*,<span class="keyword">const</span> <span class="keywordtype">char</span>*);   <span class="comment">// change completely cell map</span>
<a name="l00151"></a>00151     
<a name="l00152"></a>00152     <span class="keywordtype">void</span> EnableDelta();
<a name="l00153"></a>00153     <span class="keywordtype">void</span> EnableTally();
<a name="l00154"></a>00154     <span class="keywordtype">void</span> KeepSource();
<a name="l00155"></a>00155     
<a name="l00156"></a>00156     <span class="keyword">virtual</span> <span class="keywordtype">void</span> AssignCell(){<span class="keywordflow">if</span>(str_src.size()) AssignArray(A,str_src);}
<a name="l00157"></a>00157     <span class="keywordtype">void</span> SetCell(<span class="keywordtype">string</span> str){AssignArray(A,str);} <span class="comment">// only for initialization</span>
<a name="l00158"></a>00158     
<a name="l00159"></a>00159     <span class="keyword">virtual</span> <span class="keywordtype">void</span> AssignSource(){<span class="keywordflow">if</span>(str_src.size()) AssignArray(S,str_src);}
<a name="l00160"></a>00160     <span class="keywordtype">void</span> SetSource(<span class="keywordtype">string</span> str){str_src=str;AssignArray(S,str);}
<a name="l00161"></a>00161     
<a name="l00162"></a>00162     <span class="keyword">virtual</span> <span class="keywordtype">void</span> AssignConductivity(){<span class="keywordflow">if</span>(str_con.size()) AssignArray(con,str_con);}
<a name="l00163"></a>00163     <span class="keywordtype">void</span> SetConductivity(<span class="keywordtype">string</span> str){str_con=str; AssignArray(con,str);}  
<a name="l00164"></a>00164     
<a name="l00165"></a>00165     <span class="keyword">virtual</span> <span class="keywordtype">void</span> AssignCapacity(){<span class="keywordflow">if</span>(str_cap.size()) AssignArray(cap,str_cap);}
<a name="l00166"></a>00166     <span class="keywordtype">void</span> SetCapacity(<span class="keywordtype">string</span> str){str_cap=str; AssignArray(cap,str);}
<a name="l00167"></a>00167     
<a name="l00168"></a>00168     <span class="keywordtype">void</span> SetTimestep(<span class="keywordtype">double</span> dt);
<a name="l00169"></a>00169     <span class="keywordtype">void</span> SetSpacestep(<span class="keywordtype">double</span> h);
<a name="l00170"></a>00170     
<a name="l00171"></a>00171     <span class="keywordtype">int</span> Step(<span class="keywordtype">int</span> n=1, <span class="keywordtype">bool</span> gather=<span class="keyword">true</span>, <span class="keyword">class</span> <a class="code" href="classomd_1_1FDTDCoupler.html">FDTDCoupler</a>* coupler=NULL);
<a name="l00172"></a>00172     
<a name="l00173"></a>00173     <span class="keywordtype">void</span> Dump(std::ostream&amp; ofl);
<a name="l00174"></a>00174     <span class="keywordtype">void</span> ForcePeriodic(<span class="keywordtype">int</span> bitmask) {forced_periodic=bitmask;} <span class="comment">// (00000ZYX)b</span>
<a name="l00175"></a>00175     
<a name="l00176"></a>00176     <span class="keywordtype">int</span> GetNCP(){<span class="keywordflow">return</span> ncp;} <span class="comment">// # of local cell</span>
<a name="l00177"></a>00177     <span class="keywordtype">int</span>* GetCellList(){<span class="keywordflow">return</span> clist[me];}
<a name="l00178"></a>00178     
<a name="l00179"></a>00179   };
<a name="l00180"></a>00180   
<a name="l00181"></a>00181   <span class="comment">// to be inherited by any coupling algorithms</span>
<a name="l00182"></a>00182 
<a name="l00183"></a><a class="code" href="classomd_1_1FDTDCoupler.html">00183</a>   <span class="keyword">class </span><a class="code" href="classomd_1_1FDTDCoupler.html">FDTDCoupler</a> {
<a name="l00184"></a>00184   <span class="keyword">public</span>:
<a name="l00185"></a>00185     <span class="keyword">virtual</span> <span class="keywordtype">void</span> init(<a class="code" href="classomd_1_1FDTDSolver.html">FDTDSolver</a>*){};
<a name="l00186"></a>00186     <span class="keyword">virtual</span> <span class="keywordtype">void</span> head(<a class="code" href="classomd_1_1FDTDSolver.html">FDTDSolver</a>*){};
<a name="l00187"></a>00187     <span class="keyword">virtual</span> <span class="keywordtype">void</span> tail(<a class="code" href="classomd_1_1FDTDSolver.html">FDTDSolver</a>*){};
<a name="l00188"></a>00188   };
<a name="l00189"></a>00189   
<a name="l00190"></a>00190 }
<a name="l00191"></a>00191 
<a name="l00192"></a>00192 <span class="preprocessor">#endif</span>
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